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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015941266.1_cds_XP_016485228.1_76173
CDS Infomation

[gene=LOC107805669] [db_xref=GeneID:107805669] [protein=2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial-like isoform X2] [protein_id=XP_016485228.1] [location=join(15341..15541,15947..16084,16166..16348,17316..17473,17575..17674,17765..17876,17972..18111,18234..18419,18515..18682)] [gbkey=CDS]
Sequence

ATGGGATTCCTCAGAATCCTCCTCTCTAATTCTAGGCTAATTCATAGAATTGGTAATAAA
CAACCAGTTGGCAAATTCCATGGTGCACTTGTTGGTTCTTCAACAAGTCTTCTATCATTT
CACCGGTTTGAGTCTACCAACACACTCAAATTAGTGCAACCTTCTCTCTTTACTGAAAAT
GATGATAATGATTATTTTCAGGTCATGGATTTTCCTGGAGGGCAGCTTCCAATTACTCCT
CAAATGAAATTTATTGCAGAGTCATCTGAAAAGAGGTTACCTTGTTATAGAGTCCTTGAT
GATGATGGCTATCCAATTCCAGGCAGCATTTTTGAGGAGGTGAGCAAAGAATTGGCTGTA
AAAATGTATAGTTCAATGGTGACACTTCAAGTTATGGATACCATATTTTATGAAGCACAA
AGGCAGGGGAGGTTATCTTTCTATCTCACTACTGCTGGAGAAGAAGGTATCAACATAGCA
TCTGCTGCTGCTCTCTCCGTCGATGACTTCGTCTTGCCTCAGTATAGGGAAGTAGGGGTT
ATCTTATGGCGGGGCTTCCCCCTGAAAGATATTGCCAATCAATTGTTCGGAAACAAGTTT
GATTATGGAAAAGGAAGGCAAATGCCATGCCACCATGGTTCTAATGAGCTCAATTACTTA
ACTATTTCTTCGCCAATAGCGACACAGATTCCTCAGGCCGCGGGCGTTGCTTACTCTCTG
AAAATGGATAAAAAGGAGGCTTGTGCTATTACTTATCTTGGAGATGGTAGCACCAGTGAG
GGTGATTTTCATGCTGCTTTAAACTTTGCAGCGGTTTTGGACGCTCCTGTTGTCTTTATA
TGCCGCAACAATGGATGGGCCATTAGCACTCCTGTAAACGAACAATTTCGAAGTGATGGA
GTTGCCTCAAAGGGTCAAGCCTATGGAATTAGAAGCATTCGTGTAGATGGCAATGATGTC
TTGGCAACTCATAGTGCTATTCGTGCAGCTCGCGAAATGGCAATTAAGGAACAAAAGCCA
ATATTAGTAGAGGCCATGACTTATAGAGTAGCCCACCATTCAACATCTGATGATTCAACC
AAGTATCGACCCGTCGAAGAAATAGAGCACTGGAAAACAGCAAAAAGTCCAATATCCAGA
TTCAGAAAATGGATTCAGAGAAATGGTTGGTGGAATGATGAAAATGAATCTGAACTTCGC
GGAGACACCAGAAAACAGGTATTGCAAGTAATGCAAGCAGCAGAGAAGGTGGAGAAACCT
CCATTGACAGATTTGTTTACGGATGTTTATGACAAAGTGCCATTAAATCTTCAAGAGCAA
CACAAGTTTATTAGGGATGCTGTAAAGAAATCTCCAAGAGAGTATCCTTCTGATGTTCCT
ATATAA

Peptide Sequence

PEP ID

XP_016485228.1
PEP Infomation

PREDICTED: 2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial-like isoform X2 [Nicotiana tabacum]
Sequence

MGFLRILLSNSRLIHRIGNKQPVGKFHGALVGSSTSLLSFHRFESTNTLKLVQPSLFTEN
DDNDYFQVMDFPGGQLPITPQMKFIAESSEKRLPCYRVLDDDGYPIPGSIFEEVSKELAV
KMYSSMVTLQVMDTIFYEAQRQGRLSFYLTTAGEEGINIASAAALSVDDFVLPQYREVGV
ILWRGFPLKDIANQLFGNKFDYGKGRQMPCHHGSNELNYLTISSPIATQIPQAAGVAYSL
KMDKKEACAITYLGDGSTSEGDFHAALNFAAVLDAPVVFICRNNGWAISTPVNEQFRSDG
VASKGQAYGIRSIRVDGNDVLATHSAIRAAREMAIKEQKPILVEAMTYRVAHHSTSDDST
KYRPVEEIEHWKTAKSPISRFRKWIQRNGWWNDENESELRGDTRKQVLQVMQAAEKVEKP
PLTDLFTDVYDKVPLNLQEQHKFIRDAVKKSPREYPSDVPI

Transcript Sequence

Gene sequence data has not been registered.